PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK27085.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 295aa    MW: 32515.2 Da    PI: 8.4136
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK27085.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM116.72.4e-36531971128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra..........tksgy 82 
                lp+G++F+Ptd+el+ e+L++kve+k+++ +        +i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+            + +
  PK27085.1  53 LPAGVKFDPTDQELI-EHLEAKVEDKDMKSHPlidefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecdhlqqGGETR 150
                799************.99*********5553344444434666646**********.555666799******************8576666664433778 PP

        NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  PK27085.1 151 WHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 197
                ************.999***********5547999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.29E-3949216IPR003441NAC domain
PROSITE profilePS5100532.52453216IPR003441NAC domain
PfamPF023659.1E-1754197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
ILKAMNKSSN QLGSSITSSD LIDAKLEEHQ MCGSKHCPGC GHKLEGKPDW LGLPAGVKFD  60
PTDQELIEHL EAKVEDKDMK SHPLIDEFIP TIEGEDGICY THPEKLPGVT RDGLSRHFFH  120
RPSKAYTTGT RKRRKIQTEC DHLQQGGETR WHKTGKTRPV MVNGKQKGCK KILVLYTNFG  180
KNRKPEKTNW VMHQYHLGQH EEEKEGELVV SKIFYQTQPR QCNWSDRAAS AAASVVVAEG  240
ISSDGGGGIG GGGGGRRDST GSGSCSSKEI SSSGNIINNP QRDQHHHHNQ MVAAX
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00460DAPTransfer from AT4G29230Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010110863.11e-160NAC domain-containing protein 8
SwissprotO494591e-102NAC73_ARATH; NAC domain-containing protein 73
TrEMBLW9S6I11e-160W9S6I1_9R
STRINGPOPTR_0018s06790.11e-157(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45203458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-145NAC domain containing protein 75